| add(const Pattern &pattern, const Pattern &pattern2, std::vector< FeatureType > &features, bool checkifexists=true) | PatternAlignmentModel< FeatureType > | inline |
| attachcorpus(unsigned char *corpusstart, unsigned int corpussize) | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | inlinevirtual |
| attachcorpus(const IndexedCorpus &corpus) | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | inlinevirtual |
| begin() | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| begin() const | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inline |
| classencodingversion | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | protected |
| const_iterator typedef | PatternAlignmentModel< FeatureType > | |
| corpussize | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | protected |
| corpusstart | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | protected |
| data | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | protected |
| detachcorpus() | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | inlinevirtual |
| end() | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| end() const | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inline |
| erase(const Pattern &pattern) | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| erase(const_iterator position) | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inline |
| find(const Pattern &pattern) | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| find(const Pattern &pattern) const | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inline |
| find(const PatternPointer &pattern) | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| find(const PatternPointer &pattern) const | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inline |
| getcorpus() const | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | inline |
| getcorpussize() const | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | inline |
| getdata(const Pattern &pattern, bool makeifnew=false) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| getdata(const PatternPointer &patternpointer, bool makeifnew=false) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| getdata(const Pattern &pattern, const Pattern &pattern2, bool makeifnew=false) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| getinterface() | PatternAlignmentModel< FeatureType > | inline |
| getmodeltype() const | PatternAlignmentModel< FeatureType > | inlinevirtual |
| getmodelversion() const | PatternAlignmentModel< FeatureType > | inlinevirtual |
| getstoreinterface() | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | inlinevirtual |
| has(const Pattern &pattern) const | PatternAlignmentModel< FeatureType > | inlinevirtual |
| has(const PatternPointer &pattern) const | PatternAlignmentModel< FeatureType > | inlinevirtual |
| has(const Pattern &pattern, const Pattern &pattern2) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| has(const PatternPointer &patternpointer, const PatternPointer &patternpointer2) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| insert(const Pattern &pattern, PatternFeatureVectorMap< FeatureType > &value) | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| insert(const Pattern &pattern) | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| iterator typedef | PatternAlignmentModel< FeatureType > | |
| load(std::string filename, const PatternModelOptions options, PatternModelInterface *constrainmodel=NULL) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| load(std::istream *f, PatternModelOptions options, PatternModelInterface *constrainmodel=NULL) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| maxlength() const | PatternAlignmentModel< FeatureType > | inlinevirtual |
| maxn | PatternAlignmentModel< FeatureType > | protected |
| minlength() const | PatternAlignmentModel< FeatureType > | inlinevirtual |
| minn | PatternAlignmentModel< FeatureType > | protected |
| model_type | PatternAlignmentModel< FeatureType > | protected |
| model_version | PatternAlignmentModel< FeatureType > | protected |
| occurrencecount(const Pattern &pattern) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| operator[](const Pattern &pattern) | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| operator[](const PatternPointer &pattern) | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| PatternAlignmentModel() | PatternAlignmentModel< FeatureType > | inline |
| PatternAlignmentModel(std::istream *f, PatternModelOptions options, PatternModelInterface *constrainmodel=NULL) | PatternAlignmentModel< FeatureType > | inline |
| PatternAlignmentModel(const std::string filename, const PatternModelOptions options, PatternModelInterface *constrainmodel=NULL) | PatternAlignmentModel< FeatureType > | inline |
| PatternMap() | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inline |
| PatternMapStore() | PatternMapStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType >, uint64_t, Pattern > | inline |
| PatternStore() | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | inline |
| patterntype | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | protected |
| postread(const PatternModelOptions options) | PatternAlignmentModel< FeatureType > | inlineprotectedvirtual |
| print(std::ostream *out, ClassDecoder &sourcedecoder, ClassDecoder &targetdecoder) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| printmodel(std::ostream *out, ClassDecoder &sourcedecoder, ClassDecoder &targetdecoder) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| read(std::istream *in, int MINTOKENS=0, int MINLENGTH=0, int MAXLENGTH=999999, PatternStoreInterface *constrainstore=NULL, bool DONGRAMS=true, bool DOSKIPGRAMS=true, bool DOFLEXGRAMS=true, bool DORESET=false, bool DEBUG=false) | PatternMapStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType >, uint64_t, Pattern > | inline |
| read(std::string filename, int MINTOKENS=0, int MINLENGTH=0, int MAXLENGTH=999999, PatternStoreInterface *constrainstore=NULL, bool DONGRAMS=true, bool DOSKIPGRAMS=true, bool DOFLEXGRAMS=true, bool DORESET=false, bool DEBUG=false) | PatternMapStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType >, uint64_t, Pattern > | inline |
| reserve(size_t s) | PatternMap< PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType > > | inlinevirtual |
| size() const | PatternAlignmentModel< FeatureType > | inlinevirtual |
| tokens() const | PatternAlignmentModel< FeatureType > | inline |
| totaltokens | PatternAlignmentModel< FeatureType > | protected |
| totaltypes | PatternAlignmentModel< FeatureType > | protected |
| type() const | PatternAlignmentModel< FeatureType > | inline |
| types() const | PatternAlignmentModel< FeatureType > | inline |
| use_v1_format() | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | inlinevirtual |
| valuehandler | PatternMapStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType >, uint64_t, Pattern > | protected |
| version() const | PatternAlignmentModel< FeatureType > | inline |
| write(std::ostream *out) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| write(const std::string filename) | PatternAlignmentModel< FeatureType > | inlinevirtual |
| ~PatternMapStore() | PatternMapStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, PatternFeatureVectorMap< FeatureType >, PatternFeatureVectorMapHandler< FeatureType >, uint64_t, Pattern > | inlinevirtual |
| ~PatternStore() | PatternStore< std::unordered_map< Pattern, PatternFeatureVectorMap< FeatureType > >, uint64_t, Pattern > | inlinevirtual |